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Eliciting specialized frames from corpora using argument-structure extraction techniques
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In: ISSN: 0929-9971 ; Terminology. International Journal of Theoretical and Applied Issues in Specialized Communication ; https://hal.archives-ouvertes.fr/hal-02318280 ; Terminology. International Journal of Theoretical and Applied Issues in Specialized Communication , John Benjamins Publishing, 2019, 25 (1), pp.1-31. ⟨10.1075/term.00026.san⟩ (2019)
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Ontological and Non-Ontological Resources for Associating Medical Dictionary for Regulatory Activities Terms to SNOMED Clinical Terms With Semantic Properties
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In: ISSN: 1663-9812 ; Frontiers in Pharmacology ; https://hal.sorbonne-universite.fr/hal-02298372 ; Frontiers in Pharmacology, Frontiers, 2019, 10, pp.975. ⟨10.3389/fphar.2019.00975⟩ (2019)
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Abstract:
International audience ; Background: Formal definitions allow selecting terms (e.g., identifying all terms related to “Infectious disease” using the query “has causative agent organism”) and terminological reasoning (e.g., “hepatitis B” is a “hepatitis” and is an “infectious disease”). However, the standard international terminology Medical Dictionary for Regulatory Activities (MedDRA) used for coding adverse drug reactions in pharmacovigilance databases does not beneficiate from such formal definitions. Our objective was to evaluate the potential of reuse of ontological and non-ontological resources for generating such definitions for MedDRA.Methods: We developed several methods that collectively allow a semiautomatic semantic enrichment of MedDRA: 1) using MedDRA-to-SNOMED Clinical Terms (SNOMED CT) mappings (available in the Unified Medical Language System metathesaurus or other mapping resources, e.g., the MedDRA preferred term “hepatitis B” is associated to the SNOMED CT concept “type B viral hepatitis”) to extract term definitions (e.g., “hepatitis B” is associated with the following properties: has finding site liver structure, has associated morphology inflammation morphology, and has causative agent hepatitis B virus); 2) using MedDRA labels and lexical/syntactic methods for automatic decomposition of complex MedDRA terms (e.g., the MedDRA systems organ class “blood and lymphatic system disorders” is decomposed in blood system disorders and lymphatic system disorders) or automatic suggestions of properties (e.g., the string “cyclic” in preferred term “cyclic neutropenia” leads to the property has clinical course cyclic).Results: The Unified Medical Language System metathesaurus was the main ontological resource reusable for generating formal definitions for MedDRA terms. The non-ontological resources (another mapping resource provided by Nadkarni and Darer in 2010 and MedDRA labels) allowed defining few additional preferred terms. While the Ci4SeR tool helped the curator to define 1,935 terms by suggesting potential supplemental relations based on the parents’ and siblings’ semantic definition, defining manually all MedDRA terms remains expensive in time.Discussion: Several ontological and non-ontological resources are available for associating MedDRA terms to SNOMED CT concepts with semantic properties, but providing manual definitions is still necessary. The ontology of adverse events is a possible alternative but does not cover all MedDRA terms either. Perspectives are to implement more efficient techniques to find more logical relations between SNOMED CT and MedDRA in an automated way.
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Keyword:
[INFO.INFO-CL]Computer Science [cs]/Computation and Language [cs.CL]; [SDV.IB]Life Sciences [q-bio]/Bioengineering; [SDV.SP]Life Sciences [q-bio]/Pharmaceutical sciences; adverse drug reaction; clinical terminology; Medical Dictionary for Regulatory Activities; ontology; pharmacovigilance; SNOMED Clinical Terms
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URL: https://hal.sorbonne-universite.fr/hal-02298372
https://hal.sorbonne-universite.fr/hal-02298372/document
https://hal.sorbonne-universite.fr/hal-02298372/file/fphar-10-00975.pdf
https://doi.org/10.3389/fphar.2019.00975
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Des constructions à tous les niveaux des discours spécialisés ? Propositions méthodologiques
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In: https://halshs.archives-ouvertes.fr/halshs-02371684 ; Master. Séminaire de linguistique allemand moderne, Paris, France. 2019 ; Séminaire de linguistique allemand moderne (2019)
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TemPO : towards a conceptualisation of pathology in speech and language therapy
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In: Actes TALN 6RECITAL 2019 ; Terminologie et Intelligence Artificielle - Atelier TALN-RECITAL et IC (PFIA 2019) ; https://hal.archives-ouvertes.fr/hal-02193859 ; Terminologie et Intelligence Artificielle - Atelier TALN-RECITAL et IC (PFIA 2019), Jul 2019, Toulouse, France ; https://tia.limsi.fr/2019/ (2019)
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TermEval: an automatic metric for evaluating terminology translation in MT
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In: Haque, Rejwanul orcid:0000-0003-1680-0099 , Hasanuzzaman, Mohammed orcid:0000-0003-1838-0091 and Way, Andy orcid:0000-0001-5736-5930 (2019) TermEval: an automatic metric for evaluating terminology translation in MT. In: CICLing 2019, the 20th International Conference on Computational Linguistics and Intelligent Text Processing, 07-13 Apr 2019, La Rochelle, France. (2019)
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TermEval: an automatic metric for evaluating terminology translation in MT
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In: Haque, Rejwanul orcid:0000-0003-1680-0099 , Hasanuzzaman, Mohammed orcid:0000-0003-1838-0091 and Way, Andy orcid:0000-0001-5736-5930 (2019) TermEval: an automatic metric for evaluating terminology translation in MT. In: CICLing 2019: the 20th International Conference on Computational Linguistics and Intelligent Text Processing, 7-13 Apr 2019, La Rochelle, France. (2019)
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An iconic approach to the browsing of medical terminologies
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In: MEDINFO ; https://hal.archives-ouvertes.fr/hal-03479242 ; MEDINFO, 2019, Lyon, France (2019)
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Origine des syntagmes "transboundary animal diseases" et "maladies animales transfrontalières/transfrontières" en anglais et en français
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In: ISSN: 0754-2186 ; Epidémiologie et Santé Animale ; https://hal.archives-ouvertes.fr/hal-02441281 ; Epidémiologie et Santé Animale, Association pour l'Etude de l'Epidémiologie des Maladies Animales (AEEMA), 2019, Les maladies animales transfrontalières, pp.5-25 (2019)
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Differences in Narrative Language in Evaluations of Medical Students by Gender and Under-represented Minority Status.
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In: Journal of general internal medicine, vol 34, iss 5 (2019)
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Differences in Narrative Language in Evaluations of Medical Students by Gender and Under-represented Minority Status.
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In: Journal of general internal medicine, vol 34, iss 5 (2019)
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Terminology acquisition methods in Arabic : Application in the medical domain ; Méthodes d'acquisition terminologique en arabe : Application au domaine médical
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In: https://tel.archives-ouvertes.fr/tel-02326714 ; Informatique et langage [cs.CL]. Université Paris Saclay (COmUE); Université de Sfax (Tunisie). Faculté des Sciences économiques et de gestion, 2019. Français. ⟨NNT : 2019SACLS085⟩ (2019)
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Contrastive study of cultural anisomorphism (France and Spain) of criminal terminology ; Estudio contrastivo del anisomorfismo cultural (Francia y España) de la terminología penal
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In: ISSN: 1579-9794 ; Hikma ; https://hal.archives-ouvertes.fr/hal-02560392 ; Hikma, Universidad de Cordoba, 2019, 18, pp.231-260. ⟨10.21071/hikma.v18i1.11209⟩ (2019)
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Designing a virtual patient dialogue system based on terminology-rich resources: challenges and evaluation
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In: ISSN: 1351-3249 ; EISSN: 1469-8110 ; Natural Language Engineering ; https://hal.archives-ouvertes.fr/hal-02358021 ; Natural Language Engineering, Cambridge University Press (CUP), 2019, pp.1-38 (2019)
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Эпонимы и политика: семасиологические проблемы ... : Eponyms and politics: semasiological problems ...
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English terminology in molecular biology ... : АНГЛИЙСКАЯ ТЕРМИНОЛОГИЯ В МОЛЕКУЛЯРНОЙ БИОЛОГИИ ...
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Использование фреймового моделирования в процессе изучения английского языка ... : Use of Frame Modeling in Studying English ...
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Peculiarities of translation in the system of foreign language teaching ... : ОСОБЕННОСТИ ПЕРЕВОДА В СИСТЕМЕ ОБУЧЕНИЯ ИНОСТРАННОМУ ЯЗЫКУ ...
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СЛОЖНОСТЬ «ГРАНИЦ»: ПОСТАНОВКА ПРОБЛЕМЫ, ТЕРМИНОЛОГИЯ И КЛАССИФИКАЦИЯ ... : The Complexity of «Borders»: Research Agendas, Terminology and Classification ...
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ANTONYM WORDS WITH PREFIXES IN THE TERMINOLOGY OF ECONOMY IN THE ALBANIAN LANGUAGE ... : АНТОНИМНЫЕ СЛОВА С ПРИСТАВКАМИ В ЭКОНОМИЧЕСКОЙ ТЕРМИНОЛОГИИ НА АЛБАНСКОМ ЯЗЫКЕ ...
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TECHNICAL TERMINOLOGY IN ALBANIAN LANGUAGE PROBLEMS, TASKS AND RECOMMENDATIONS ... : АЛБАНСКАЯ ТЕХНИЧЕСКАЯ ТЕРМИНОЛОГИЯ ПРОБЛЕМЫ, ЗАДАЧИ И РЕКОМЕНДАЦИИ ...
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