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The IR Task at the CLEF eHealth evaluation lab 2016: User-centred health information retrieval
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Overview of the ShARe/CLEF eHealth evaluation lab 2014
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In: Kelly, Liadh orcid:0000-0003-1131-5238 , Goeuriot, Lorraine orcid:0000-0001-7491-1980 , Suominen, Hanna, Schreck, Tobias, Leroy, Gondy, Mowery, Danielle L., Velupillai, Sumithra, Chapman, Wendy, Martinez, David, Zuccon, Guido and Palotti, Joao (2014) Overview of the ShARe/CLEF eHealth evaluation lab 2014. Lecture Notes in Computer Science, 8685 . pp. 172-191. ISSN 0302-9743 (2014)
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Overview of the ShARe/CLEF eHealth evaluation lab 2014
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In: Kelly, Liadh orcid:0000-0003-1131-5238 , Goeuriot, Lorraine orcid:0000-0001-7491-1980 , Suominen, Hanna, Schreck, Tobias, Leroy, Gondy, Mowery, Danielle L., Velupillai, Sumithra, Chapman, Wendy, Martinez, David, Zuccon, Guido and Palotti, Joao (2014) Overview of the ShARe/CLEF eHealth evaluation lab 2014. In: Conference and Labs for the Evaluation Forum (CLEF 2014), 15-18 Sept 2014, Sheffield, UK. ISBN 978-3-319-11382-1 (2014)
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ShARe/CLEF eHealth evaluation lab 2014, task 3: user-centred health information retrieval
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In: Goeuriot, Lorraine orcid:0000-0001-7491-1980 , Kelly, Liadh orcid:0000-0003-1131-5238 , Li, Wei B. orcid:0000-0001-7347-3501 , Palotti, Joao, Pecina, Pavel, Zuccon, Guido, Hanbury, Allan, Jones, Gareth J.F. orcid:0000-0002-4033-9135 and Mueller, Henning (2014) ShARe/CLEF eHealth evaluation lab 2014, task 3: user-centred health information retrieval. In: Conference and Labs for the Evaluation Forum (CLEF 2014), 15-18 Sept 2014, Sheffield, UK. (2014)
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ShARe/CLEF eHealth evaluation lab 2014, task 3: user-centred health information retrieval
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In: Goeuriot, Lorraine orcid:0000-0001-7491-1980 , Kelly, Liadh orcid:0000-0003-1131-5238 , Li, Wei B. orcid:0000-0001-7347-3501 , Palotti, Joao, Zuccon, Guido, Hanbury, Allan, Jones, Gareth J.F. orcid:0000-0002-4033-9135 and Mueller, Henning (2014) ShARe/CLEF eHealth evaluation lab 2014, task 3: user-centred health information retrieval. CLEF 2014 Online Working Notes, 1180 . pp. 43-61. ISSN 1613-0073 (2014)
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ShARe/CLEF eHealth Evaluation Lab 2014, Task 3: User-centred health information retrieval
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In: Proceedings of CLEF 2014 ; https://hal.archives-ouvertes.fr/hal-01086554 ; Proceedings of CLEF 2014, Sep 2014, Sheffield, United Kingdom (2014)
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Overview of the ShARe/CLEF eHealth Evaluation Lab 2014
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In: Information Access Evaluation : Multilinguality, Multimodality, and Interaction ; 5th International Conference of the CLEF Initiative, CLEF 2014, Sheffield, UK, September 15-18, 2014. Proceedings / Evangelos Kanoulas . (Hrsg.). - Springer International Publishing, 2014. - (Lecture Notes in Computer Science ; 8685). - S. 172-191. - ISBN 978-3-319-11381-4 (2014)
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Overview of the ShARe/CLEF eHealth evaluation lab 2013
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Suominen, Hanna; Salanterä, Sanna; Velupillai, Sumithra; Chapman, Wendy; Savova, Guergana; Elhadad, Noemie; Pradhan, Sameer; South, Brett R.; Mowery, Danielle L.; Jones, Gareth J.F.; Leveling, Johannes; Kelly, Liadh; Martinez, David; Zuccon, Guido
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In: Suominen, Hanna, Salanterä, Sanna, Velupillai, Sumithra, Chapman, Wendy, Savova, Guergana, Elhadad, Noemie, Pradhan, Sameer, South, Brett R., Mowery, Danielle L., Jones, Gareth J.F. orcid:0000-0003-2923-8365 , Leveling, Johannes orcid:0000-0003-0603-4191 , Kelly, Liadh orcid:0000-0003-1131-5238 , Martinez, David and Zuccon, Guido (2013) Overview of the ShARe/CLEF eHealth evaluation lab 2013. Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 8138 ( . pp. 212-231. ISSN 0302-9743 (2013)
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Abstract:
Discharge summaries and other free-text reports in healthcare transfer information between working shifts and geographic locations. Patients are likely to have difficulties in understanding their content, because of their medical jargon, non-standard abbreviations, and ward-specific idioms. This paper reports on an evaluation lab with an aim to support the continuum of care by developing methods and resources that make clinical reports in English easier to understand for patients, and which helps them in finding information related to their condition. This ShARe/CLEFeHealth2013 lab offered student mentoring and shared tasks: identification and normalisation of disorders (1a and 1b) and normalisation of abbreviations and acronyms (2) in clinical reports with respect to terminology standards in healthcare as well as information retrieval (3) to address questions patients may have when reading clinical reports. The focus on patients' information needs as opposed to the specialised information needs of physicians and other healthcare workers was the main feature of the lab distinguishing it from previous shared tasks. De-identied clinical reports for the three tasks were from US intensive care and originated from the MIMIC II database. Other text documents for Task 3 were from the Internet and originated from the Khresmoi project. Task 1 annotations originated from the ShARe annotations. For Tasks 2 and 3, new annotations, queries, and relevance assessments were created. 64, 56, and 55 people registered their interest in Tasks 1, 2, and 3, respectively. 34 unique teams (3 members per team on average) participated with 22, 17, 5, and 9 teams in Tasks 1a, 1b, 2 and 3, respectively. The teams were from Australia, China, France, India, Ireland, Republic of Korea, Spain, UK, and USA. Some teams developed and used additional annotations, but this strategy contributed to the system performance only in Task 2. The best systems had the F1 score of 0.75 in Task 1a; Accuracies of 0.59 and 0.72 in Tasks 1b and 2; and Precision at 10 of 0.52 in Task 3. The results demonstrate the substantial community interest and capabilities of these systems in making clinical reports easier to understand for patients. The organisers have made data and tools available for future research and development.
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Keyword:
Evaluation; Information retrieval; Medical information retrieval
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URL: http://doras.dcu.ie/20120/
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Khresmoi professional: multilingualsSemantic search for medical professionals
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In: Kelly, Liadh orcid:0000-0003-1131-5238 , Hanbury, Allan, Jones, Gareth J.F. orcid:0000-0003-2923-8365 , Goeuriot, Lorraine orcid:0000-0001-7491-1980 and Mueller, Henning (2013) Khresmoi professional: multilingualsSemantic search for medical professionals. In: SIGIR 2013 Health Search and Discovery HSD workshop, 1 Aug 2013, Dublin, Ireland. (2013)
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