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All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year Sort by creator [A → Z]' creator [Z → A]' publishing year ↑ (asc)' publishing year ↓ (desc)' title [A → Z]' title [Z → A]' Simple Search Hits 1 – 12 of 12 1 ChEMU 2020: Natural Language Processing Methods Are Effective for Information Extraction From Chemical Patents He, Jiayuan; Nguyen, Dat Quoc; Akhondi, Saber A.... In: Front Res Metr Anal (2021) BASE Show details 2 Improving Chemical Named Entity Recognition in Patents with Contextualized Word Embeddings ... Zhai, Zenan; Nguyen, Dat Quoc; Akhondi, Saber A.. - : arXiv, 2019 BASE Show details 3 [The Confusion Assessment Method: Transcultural adaptation of a French version] Antoine, Valery; Belmin, J.; Blain, H.... In: ISSN: 0398-7620 ; Epidemiology and Public Health / Revue d'Epidémiologie et de Santé Publique ; https://hal.archives-ouvertes.fr/hal-02337685 ; Epidemiology and Public Health / Revue d'Epidémiologie et de Santé Publique, Elsevier Masson, 2018, 66 (3), pp.187--194. ⟨10.1016/j.respe.2018.01.133⟩ (2018) BASE Show details 4 A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC Kors, Jan A.; Clematide, Simon; Akhondi, Saber A.. - 2017 BASE Show details 5 Chemical entity recognition in patents by combining dictionary-based and statistical approaches Akhondi, Saber A.; Pons, Ewoud; Afzal, Zubair. - : Oxford University Press, 2016 BASE Show details 6 Extraction of chemical-induced diseases using prior knowledge and textual information Pons, Ewoud; Becker, Benedikt F.H.; Akhondi, Saber A.; Afzal, Zubair; van Mulligen, Erik M.; Kors, Jan A.. - : Oxford University Press, 2016 Abstract: We describe our approach to the chemical–disease relation (CDR) task in the BioCreative V challenge. The CDR task consists of two subtasks: automatic disease-named entity recognition and normalization (DNER), and extraction of chemical-induced diseases (CIDs) from Medline abstracts. For the DNER subtask, we used our concept recognition tool Peregrine, in combination with several optimization steps. For the CID subtask, our system, which we named RELigator, was trained on a rich feature set, comprising features derived from a graph database containing prior knowledge about chemicals and diseases, and linguistic and statistical features derived from the abstracts in the CDR training corpus. We describe the systems that were developed and present evaluation results for both subtasks on the CDR test set. For DNER, our Peregrine system reached an F-score of 0.757. For CID, the system achieved an F-score of 0.526, which ranked second among 18 participating teams. Several post-challenge modifications of the systems resulted in substantially improved F-scores (0.828 for DNER and 0.602 for CID). RELigator is available as a web service at http://biosemantics.org/index.php/software/religator. Keyword: Original Article URL: https://doi.org/10.1093/database/baw046 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4831722/ http://www.ncbi.nlm.nih.gov/pubmed/27081155 BASE Hide details 7 The CHEMDNER corpus of chemicals and drugs and its annotation principles Krallinger, Martin; Rabal, Obdulia; Leitner, Florian. - : BioMed Central, 2015 BASE Show details 8 A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC ... Kors, Jan A; Clematide, Simon; Akhondi, Saber A. - : BMJ Publishing Group, 2015 BASE Show details 9 A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC Kors, Jan A; Clematide, Simon; Akhondi, Saber A. - : Oxford University Press, 2015 BASE Show details 10 Creating Multilingual Gold Standard Corpora for Biomedical Concept Recognition ... Kors, Jan A; Clematide, Simon; Akhondi, Saber A. - : CLEF, 2013 BASE Show details 11 Creating Multilingual Gold Standard Corpora for Biomedical Concept Recognition Jan A. Kors; Simon Clematide; Saber A. Akhondi... In: http://ceur-ws.org/Vol-1179/CLEF2013wn-CLEFER-KorsEt2013.pdf BASE Show details 12 RESEARCH Open Access The CHEMDNER corpus of chemicals and drugs and its annotation principles Martin Krallinger; Obdulia Rabal; Florian Leitner... In: http://www.jcheminf.com/content/pdf/1758-2946-7-S1-S2.pdf BASE Show details

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