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1
DYT-TUBB4A (DYT4 Dystonia): New Clinical and Genetic Observations.
In: Neurology, vol. 96, no. 14, pp. e1887-e1897 (2021)
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2
Contributions of common genetic variants to risk of schizophrenia among individuals of African and Latino ancestry.
In: Molecular psychiatry, vol 25, iss 10 (2020)
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3
Contributions of common genetic variants to risk of schizophrenia among individuals of African and Latino ancestry.
In: Molecular psychiatry, vol 25, iss 10 (2020)
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4
Spatially explicit analysis reveals complex human genetic gradients in the Iberian Peninsula
Pimenta, J; Lopes, AM; Carracedo, A. - : Nature Publishing Group, 2019
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5
Functionally distinct ERAP1 and ERAP2 are a hallmark of HLA-A29-(Birdshot) Uveitis.
In: Human molecular genetics, vol 27, iss 24 (2018)
Abstract: Birdshot Uveitis (Birdshot) is a rare eye condition that affects HLA-A29-positive individuals and could be considered a prototypic member of the recently proposed 'MHC-I (major histocompatibility complex class I)-opathy' family. Genetic studies have pinpointed the endoplasmic reticulum aminopeptidase (ERAP1) and (ERAP2) genes as shared associations across MHC-I-opathies, which suggests ERAP dysfunction may be a root cause for MHC-I-opathies. We mapped the ERAP1 and ERAP2 haplotypes in 84 Dutch cases and 890 controls. We identified association at variant rs10044354, which mediated a marked increase in ERAP2 expression. We also identified and cloned an independently associated ERAP1 haplotype (tagged by rs2287987) present in more than half of the cases; this ERAP1 haplotype is also the primary risk and protective haplotype for other MHC-I-opathies. We show that the risk ERAP1 haplotype conferred significantly altered expression of ERAP1 isoforms in transcriptomic data (n = 360), resulting in lowered protein expression and distinct enzymatic activity. Both the association for rs10044354 (meta-analysis: odds ratio (OR) [95% CI]=2.07[1.58-2.71], P = 1.24 × 10(-7)) and rs2287987 (OR[95% CI]: =2.01[1.51-2.67], P = 1.41 × 10(-6)) replicated and showed consistent direction of effect in an independent Spanish cohort of 46 cases and 2103 controls. In both cohorts, the combined rs2287987-rs10044354 haplotype associated with Birdshot more strongly than either variant alone [meta-analysis: P=3.9 × 10(-9)]. Finally, we observed that ERAP2 protein expression is dependent on the ERAP1 background across three European populations (n = 3353). In conclusion, a functionally distinct combination of ERAP1 and ERAP2 are a hallmark of Birdshot and provide rationale for strategies designed to correct ERAP function for treatment of Birdshot and MHC-I-opathies more broadly.
Keyword: Aminopeptidases; Biological Sciences; Female; Genetic Association Studies; Genetic Predisposition to Disease; Genetics & Heredity; Genotype; Haplotypes; HLA-A Antigens; Humans; Male; Medical and Health Sciences; Minor Histocompatibility Antigens; Minor Histocompatibility Loci; Polymorphism; Single Nucleotide; Uveitis
URL: https://escholarship.org/uc/item/7qp7c94x
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6
Enrichment of genetic markers of recent human evolution in educational and cognitive traits.
In: Scientific reports, vol 8, iss 1 (2018)
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7
Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence.
In: Nature genetics, vol 50, iss 7 (2018)
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8
Multi-Trait Analysis of GWAS and Biological Insights Into Cognition: A Response to Hill (2018).
In: Twin research and human genetics : the official journal of the International Society for Twin Studies, vol 21, iss 5 (2018)
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9
Global genetic differentiation of complex traits shaped by natural selection in humans.
In: Nature communications, vol. 9, no. 1, pp. 1865 (2018)
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10
GWAS meta-analysis reveals novel loci and genetic correlates for general cognitive function: a report from the COGENT consortium.
In: Molecular psychiatry, vol 22, iss 3 (2017)
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11
AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data.
In: BMC bioinformatics, vol 18, iss 1 (2017)
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12
A Neolithic expansion, but strong genetic structure, in the independent history of New Guinea. ...
Bergström, Anders; Oppenheimer, Stephen J; Mentzer, Alexander J. - : Apollo - University of Cambridge Repository, 2017
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13
An ancient selective sweep linked to reproductive life history evolution in sockeye salmon
Veale, Andrew; Russello, M.A.. - : Nature Publishing Group, 2017
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14
An ancient selective sweep linked to reproductive life history evolution in sockeye salmon
Veale, Andrew; Russello, M.A.. - : Nature Publishing Group, 2017
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15
A Neolithic expansion, but strong genetic structure, in the independent history of New Guinea
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16
Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104.
In: ISSN: 0099-2240 ; EISSN: 1098-5336 ; Applied and Environmental Microbiology ; https://hal-pasteur.archives-ouvertes.fr/pasteur-01421019 ; Applied and Environmental Microbiology, American Society for Microbiology, 2016, 82 (8), pp.2516-26. ⟨10.1128/AEM.03821-15⟩ (2016)
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17
Coevolution of genes and languages and high levels of population structure among the highland populations of Daghestan.
In: Journal of human genetics, vol 61, iss 3 (2016)
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18
Fine-Scale Human Population Structure in Southern Africa Reflects Ecogeographic Boundaries.
In: Genetics, vol 204, iss 1 (2016)
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19
Dyslexia and language impairment associated genetic markers influence cortical thickness and white matter in typically developing children.
In: Brain imaging and behavior, vol 10, iss 1 (2016)
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20
Dyslexia and language impairment associated genetic markers influence cortical thickness and white matter in typically developing children.
In: Brain imaging and behavior, vol 10, iss 1 (2016)
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