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All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year Sort by creator [A → Z]' creator [Z → A]' publishing year ↑ (asc)' publishing year ↓ (desc)' title [A → Z]' title [Z → A]' Simple Search Page: 1 2 3 Hits 1 – 20 of 57 1 Learning Disentangled Representations of Negation and Uncertainty ... Vasilakes, Jake; Zerva, Chrysoula; Miwa, Makoto. - : arXiv, 2022 BASE Show details 2 Natural language processing applied to mental illness detection: a narrative review Zhang, Tianlin; Schoene, Annika M.; Ji, Shaoxiong... In: NPJ Digit Med (2022) BASE Show details 3 Investigating Text Simplification Evaluation ... Vásquez-Rodríguez, Laura; Shardlow, Matthew; Przybyła, Piotr. - : arXiv, 2021 BASE Show details 4 Investigating Text Simplification Evaluation ... The Joint Conference of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing 2021; Ananiadou, Sophia; Przybyła, Piotr. - : Underline Science Inc., 2021 BASE Show details 5 Towards BERT-based Automatic ICD Coding: Limitations and Opportunities Pascual, Damian; Wattenhofer, Roger; Luck, Sandro In: Proceedings of the 20th Workshop on Biomedical Language Processing (2021) BASE Show details 6 BioVAE: a pre-trained latent variable language model for biomedical text mining Trieu, Hai-Long; Miwa, Makoto; Ananiadou, Sophia In: Bioinformatics (2021) Abstract: SUMMARY: Large-scale pre-trained language models (PLMs) have advanced state-of-the-art (SOTA) performance on various biomedical text mining tasks. The power of such PLMs can be combined with the advantages of deep generative models. These are examples of these combinations. However, they are trained only on general domain text, and biomedical models are still missing. In this work, we describe BioVAE, the first large-scale pre-trained latent variable language model for the biomedical domain, which uses the OPTIMUS framework to train on large volumes of biomedical text. The model shows SOTA performance on several biomedical text mining tasks when compared to existing publicly available biomedical PLMs. In addition, our model can generate more accurate biomedical sentences than the original OPTIMUS output. AVAILABILITY AND IMPLEMENTATION: Our source code and pre-trained models are freely available: https://github.com/aistairc/BioVAE. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Keyword: Applications Notes URL: https://doi.org/10.1093/bioinformatics/btab702 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8756089/ http://www.ncbi.nlm.nih.gov/pubmed/34636886 BASE Hide details 7 Hypothesis, analysis and synthesis: it’s all Greek to me! ... Iliopoulos, Ioannis; Ananiadou, Sophia; Danchin, Antoine. - : figshare, 2020 BASE Show details 8 Hypothesis, analysis and synthesis: it’s all Greek to me! ... Iliopoulos, Ioannis; Ananiadou, Sophia; Danchin, Antoine. - : figshare, 2020 BASE Show details 9 Hypothesis, analysis and synthesis: it’s all Greek to me! ... Iliopoulos, Ioannis; Ananiadou, Sophia; Danchin, Antoine. - : figshare, 2020 BASE Show details 10 Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks ... Li, Maolin; Myrman, Arvid Fahlström; Mu, Tingting. - : arXiv, 2019 BASE Show details 11 Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network ... Sahu, Sunil Kumar; Christopoulou, Fenia; Miwa, Makoto. - : arXiv, 2019 BASE Show details 12 Hypothesis, analysis and synthesis: it’s all Greek to me! ... Iliopoulos, Ioannis; Ananiadou, Sophia; Danchin, Antoine. - : figshare, 2019 BASE Show details 13 Improving reference prioritisation with PICO recognition Brockmeier, Austin J.; Ju, Meizhi; Przybyła, Piotr. - : BioMed Central, 2019 BASE Show details 14 Improving clinical named entity recognition in Chinese using the graphical and phonetic feature Wang, Yifei; Ananiadou, Sophia; Tsujii, Jun’ichi. - : BioMed Central, 2019 BASE Show details 15 Identification of research hypotheses and new knowledge from scientific literature ... Shardlow, Matthew; Batista-Navarro, Riza; Thompson, Paul. - : Figshare, 2018 BASE Show details 16 Identification of research hypotheses and new knowledge from scientific literature ... Shardlow, Matthew; Batista-Navarro, Riza; Thompson, Paul. - : Figshare, 2018 BASE Show details 17 Hypothesis, analysis and synthesis: it’s all Greek to me! ... Iliopoulos, Ioannis; Ananiadou, Sophia; Danchin, Antoine. - : figshare, 2018 BASE Show details 18 Constructing a biodiversity terminological inventory Nguyen, Nhung T. H.; Soto, Axel J.; Kontonatsios, Georgios. - : Public Library of Science, 2017 BASE Show details 19 Distributed Document and Phrase Co-embeddings for Descriptive Clustering Kontonatsios, Georgios; Sato, Motoki; Mu, Tingting. - : Association for Computational Linguistics, 2017 BASE Show details 20 Enriching news events with meta-knowledge information [<Journal>] Thompson, Paul [Verfasser]; Nawaz, Raheel [Sonstige]; McNaught, John [Sonstige]. DNB Subject Category Language Show details Page: 1 2 3

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