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Clinical Natural Language Processing in languages other than English: opportunities and challenges.
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In: ISSN: 2041-1480 ; Journal of Biomedical Semantics ; https://hal.archives-ouvertes.fr/hal-01842518 ; Journal of Biomedical Semantics, BioMed Central, 2018, 9, 13p. ⟨10.1186/s13326-018-0179-8⟩ (2018)
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| 5 |
Clinical Natural Language Processing in languages other than English: opportunities and challenges
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Temporal Annotation in the Clinical Domain.
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Styler, William F; Bethard, Steven; Finan, Sean; Palmer, Martha; Pradhan, Sameer; de Groen, Piet C; Erickson, Brad; Miller, Timothy; Lin, Chen; Savova, Guergana; Pustejovsky, James
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In: Transactions of the Association for Computational Linguistics, vol 2 (2014)
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Abstract:
This article discusses the requirements of a formal specification for the annotation of temporal information in clinical narratives. We discuss the implementation and extension of ISO-TimeML for annotating a corpus of clinical notes, known as the THYME corpus. To reflect the information task and the heavily inference-based reasoning demands in the domain, a new annotation guideline has been developed, "the THYME Guidelines to ISO-TimeML (THYME-TimeML)". To clarify what relations merit annotation, we distinguish between linguistically-derived and inferentially-derived temporal orderings in the text. We also apply a top performing TempEval 2013 system against this new resource to measure the difficulty of adapting systems to the clinical domain. The corpus is available to the community and has been proposed for use in a SemEval 2015 task.
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Keyword:
Artificial Intelligence and Image Processing; Cognitive Sciences; Linguistics
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URL: https://escholarship.org/uc/item/9sk3m36q
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| 7 |
Discovering body site and severity modifiers in clinical texts
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Overview of the ShARe/CLEF eHealth Evaluation Lab 2013
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In: Suominen, Hanna, Salanterä, Sanna, Velupillai, Sumithra, Chapman, Wendy, Savova, Guergana, Elhadad, Noemie, Pradhan, Sameer, South, Brett R., Mowery, Danielle L., Jones, Gareth J.F. orcid:0000-0003-2923-8365 , Leveling, Johannes orcid:0000-0003-0603-4191 , Kelly, Liadh orcid:0000-0003-1131-5238 , Goeuriot, Lorraine orcid:0000-0001-7491-1980 , Martinez, David and Zuccon, Guido (2013) Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. In: 4th International Conference of the CLEF Initiative (CLEF 2013), 23-26 Sept 2013, Valencia, Spain. ISBN 978-3-642-40802-1 (2013)
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Overview of the ShARe/CLEF eHealth evaluation lab 2013
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In: Suominen, Hanna, Salanterä, Sanna, Velupillai, Sumithra, Chapman, Wendy, Savova, Guergana, Elhadad, Noemie, Pradhan, Sameer, South, Brett R., Mowery, Danielle L., Jones, Gareth J.F. orcid:0000-0003-2923-8365 , Leveling, Johannes orcid:0000-0003-0603-4191 , Kelly, Liadh orcid:0000-0003-1131-5238 , Martinez, David and Zuccon, Guido (2013) Overview of the ShARe/CLEF eHealth evaluation lab 2013. Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 8138 ( . pp. 212-231. ISSN 0302-9743 (2013)
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Towards comprehensive syntactic and semantic annotations of the clinical narrative.
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In: Journal of the American Medical Informatics Association : JAMIA, vol 20, iss 5 (2013)
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Improved de-identification of physician notes through integrative modeling of both public and private medical text
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In: BioMed Central Ltd (2013)
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| 13 |
Towards comprehensive syntactic and semantic annotations of the clinical narrative
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| 14 |
Improved de-identification of physician notes through integrative modeling of both public and private medical text
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| 15 |
Towards Comprehensive Syntactic and Semantic Annotations of the Clinical Narrative
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In: Journal of the American Medical Informatics Association, 2013. Oxford, UK: Oxford University Press (2013)
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A system for coreference resolution for the clinical narrative
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Anaphoric relations in the clinical narrative: corpus creation
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Coreference resolution: A review of general methodologies and applications in the clinical domain
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Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications
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