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Insects with similar social complexity show convergent patterns of adaptive molecular evolution
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In: Ecology, Evolution and Organismal Biology Publications (2018)
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Taming the BEAST—A Community Teaching Material Resource for BEAST 2
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Barido-Sottani, Joelle; Boskova, Veronika; du Plessis, Louis; Kuhnert, Denise; Magnus, Carsten; Mitov, Venelin; Muller, Nicola F.; Pecerska, Julia; Rasmussen, David A.; Zhang, Chi; Drummond, Alexei J.; Heath, Tracy A.; Pybus, Oliver G.; Vaughan, Timothy G.; Stadler, Tanja
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In: Ecology, Evolution and Organismal Biology Publications (2018)
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Abstract:
Phylogenetics and phylodynamics are central topics in modern evolutionary biology. Phylogenetic methods reconstruct the evolutionary relationships among organisms, whereas phylodynamic approaches reveal the underlying diversification processes that lead to the observed relationships. These two fields have many practical applications in disciplines as diverse as epidemiology, developmental biology, palaeontology, ecology, and linguistics. The combination of increasingly large genetic data sets and increases in computing power is facilitating the development of more sophisticated phylogenetic and phylodynamic methods. Big data sets allow us to answer complex questions. However, since the required analyses are highly specific to the particular data set and question, a black-box method is not sufficient anymore. Instead, biologists are required to be actively involved with modeling decisions during data analysis. The modular design of the Bayesian phylogenetic software package BEAST 2 enables, and in fact enforces, this involvement. At the same time, the modular design enables computational biology groups to develop new methods at a rapid rate. A thorough understanding of the models and algorithms used by inference software is a critical prerequisite for successful hypothesis formulation and assessment. In particular, there is a need for more readily available resources aimed at helping interested scientists equip themselves with the skills to confidently use cutting-edge phylogenetic analysis software. These resources will also benefit researchers who do not have access to similar courses or training at their home institutions. Here, we introduce the “Taming the Beast” (https://taming-the-beast.github.io/) resource, which was developed as part of a workshop series bearing the same name, to facilitate the usage of the Bayesian phylogenetic software package BEAST 2.
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Keyword:
Behavior and Ethology; Computational Biology; Ecology and Evolutionary Biology; Systems Biology
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URL: https://lib.dr.iastate.edu/eeob_ag_pubs/254
https://lib.dr.iastate.edu/cgi/viewcontent.cgi?article=1257&context=eeob_ag_pubs
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| 23 |
From Ethological Linguistics to Animal Linguistics and Ecolinguistics
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Augustyn, Prisca. - : Association canadienne de sémiotique / Canadian Semiotic Association, 2018. : Érudit, 2018
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| 27 |
Radical Social Ecology as Deep Pragmatism: A Call to the Abolition of Systemic Dissonance and the Minimization of Entropic Chaos
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In: Student Theses 2015-Present (2018)
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| 28 |
Strukturelle historische Dialektologie des Deutschen : strukturhistorische und strukturgeographische Studien zur Vokalentwicklung deutscher Dialekte
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UB Frankfurt Linguistik
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| 29 |
Conversational skills: Detection of turn-taking violation in 6-month-old infants
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In: 14th International Congress for the Study of Child Language ; https://hal-univ-rennes1.archives-ouvertes.fr/hal-01574702 ; 14th International Congress for the Study of Child Language, Jul 2017, Lyon, France ; iascl2017.org/ (2017)
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| 30 |
Six-month-old infants are sensible to turn-taking violation
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In: WILD 2017 - Workshop on Infant Language Development ; https://hal-univ-rennes1.archives-ouvertes.fr/hal-01542775 ; WILD 2017 - Workshop on Infant Language Development, Jun 2017, Bilbao, Spain ; bcbl.eu/events/wild2017 (2017)
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| 32 |
Ethical Dimensions of Population Genetic Research in the Caucasus ...
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Ethical Dimensions of Population Genetic Research in the Caucasus ...
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Mating dances and the evolution of language: What’s the next step?
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| 37 |
Vocal combinations in guenon communication ; Des Combinaisons vocales dans la communication de cercopithèques forestiers
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In: https://hal-univ-rennes1.archives-ouvertes.fr/tel-02166188 ; Cognitive Sciences. Université de Rennes 1 [UR1]; University of St Andrews; Européenne de Bretagne, 2016. English (2016)
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| 39 |
Revista Científica Arbitrada de la Fundación MenteClara Vol. 1, Nro. 1 (2016) ...
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Revista Científica Arbitrada de la Fundación MenteClara Vol. 1, Nro. 2 (2016) ...
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