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1
Genetic Neural Architecture Search for automatic assessment of human sperm images
In: ISSN: 0957-4174 ; Expert Systems with Applications ; https://hal.archives-ouvertes.fr/hal-03585035 ; Expert Systems with Applications, Elsevier, 2022 (2022)
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2
Polygenic scores for intelligence, educational attainment and schizophrenia are differentially associated with core autism features, IQ, and adaptive behaviour in autistic individuals
In: https://hal-pasteur.archives-ouvertes.fr/pasteur-03261146 ; 2021 (2021)
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3
Analysis of cortical activity for the development of brain-computer interfaces for speech ; Analyse d'activité corticale pour le développement d'interfaces cerveau-machine pour la parole
Roussel, Philémon. - : HAL CCSD, 2021
In: https://tel.archives-ouvertes.fr/tel-03578854 ; Bioinformatics [q-bio.QM]. Université Grenoble Alpes [2020-.], 2021. English. ⟨NNT : 2021GRALS022⟩ (2021)
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4
Manual Evaluation of the Automatic Mapping of International Classification of Diseases (ICD)-11 (in French).
In: Studies in health technology and informatics ; https://hal.archives-ouvertes.fr/hal-03267464 ; Studies in health technology and informatics, 2020, 270, pp.1335-1336 (2020)
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5
Assisted authoring for avoiding inadequate claims in scientific reporting ; Rédaction assistée pour éviter les affirmations inappropriées dans la rédaction scientifique
Koroleva, Anna. - : HAL CCSD, 2020
In: https://tel.archives-ouvertes.fr/tel-02938856 ; Bioinformatics [q-bio.QM]. Université Paris-Saclay; Universiteit van Amsterdam, 2020. English. ⟨NNT : 2020UPASS021⟩ (2020)
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6
Hierarchical Overlap Graph
In: ISSN: 0020-0190 ; Information Processing Letters ; https://hal-lirmm.ccsd.cnrs.fr/lirmm-01674319 ; Information Processing Letters, Elsevier, 2020, 155, pp.#105862. ⟨10.1016/j.ipl.2019.105862⟩ (2020)
Abstract: International audience ; Given a set of finite words, the Overlap Graph (OG) is a complete weighted digraph where each word is a node and where the weight of an arc equals the length of the longest overlap of one word onto the other (Overlap is an asymmetric notion). The OG serves to assemble DNA fragments or to compute shortest superstrings, which are a compressed representation of the input. The OG requires space that is quadratic in the number of words, which limits its scalability. The Hierarchical Overlap Graph (HOG) is an alternative graph that also encodes all maximal overlaps, but uses space that is linear in the sum of the lengths of the input words. We propose the first algorithm to build the HOG in linear space for words of equal length.
Keyword: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]; [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]; ACM: F.: Theory of Computation/F.2: ANALYSIS OF ALGORITHMS AND PROBLEM COMPLEXITY/F.2.2: Nonnumerical Algorithms and Problems; Aho-Corasik; APSP; assembly; digraph; greedy; overlap graph; prefix; stringology; suffix; superstring
URL: https://doi.org/10.1016/j.ipl.2019.105862
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01674319v2/document
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01674319
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01674319v2/file/hog-art.pdf
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7
Multilingual enrichment of disease biomedical ontologies
In: Proceedings of the LREC 2020 Workshop on Multilingual Biomedical Text Processing (MultilingualBIO 2020) ; https://hal.archives-ouvertes.fr/hal-02531140 ; Proceedings of the LREC 2020 Workshop on Multilingual Biomedical Text Processing (MultilingualBIO 2020), May 2020, Marseille, France. pp.21-28 ; European Language Resources Association (2020)
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8
Hand-gesture recognition based on EMG and event-based camera sensor fusion: a benchmark in neuromorphic computing
In: ISSN: 1662-4548 ; EISSN: 1662-453X ; Frontiers in Neuroscience ; https://hal.archives-ouvertes.fr/hal-02617084 ; Frontiers in Neuroscience, Frontiers, 2020, pp.36 ; https://www.frontiersin.org/ (2020)
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9
Abstract neuron : formalizing dendritic integration and algebraic properties ; Neurone abstrait : une formalisation de l’intégration dendritique et ses propriétés algébriques
Guinaudeau, Ophélie. - : HAL CCSD, 2019
In: https://tel.archives-ouvertes.fr/tel-02389736 ; Bio-informatique [q-bio.QM]. Université Côte d'Azur, 2019. Français. ⟨NNT : 2019AZUR4001⟩ (2019)
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10
A novel framework for biomedical entity sense induction
In: ISSN: 1532-0464 ; EISSN: 1532-0480 ; Journal of Biomedical Informatics ; https://hal-lirmm.ccsd.cnrs.fr/lirmm-01851988 ; Journal of Biomedical Informatics, Elsevier, 2018, 84, pp.31-41. ⟨10.1016/j.jbi.2018.06.007⟩ (2018)
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11
Evaluation of the Terminology Coverage in the French Corpus LiSSa.
In: ISSN: 0926-9630 ; EISSN: 1879-8365 ; Studies in Health Technology and Informatics ; https://hal.archives-ouvertes.fr/hal-01843039 ; Studies in Health Technology and Informatics, IOS Press, 2018, pp.126-130 (2018)
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12
A de novo approach to disentangle partner identity and function in holobiont systems
In: ISSN: 2049-2618 ; Microbiome ; https://hal.archives-ouvertes.fr/hal-01643153 ; Microbiome, BioMed Central, 2018, pp.1-35. ⟨10.1101/221424⟩ (2018)
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13
Shared genetic aetiology between cognitive performance and brain activations in language and math tasks
In: ISSN: 2045-2322 ; EISSN: 2045-2322 ; Scientific Reports ; https://hal-cea.archives-ouvertes.fr/cea-01944702 ; Scientific Reports, Nature Publishing Group, 2018, 8, pp.17624. ⟨10.1038/s41598-018-35665-0⟩ (2018)
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14
Long-Term Cognitive Prognosis of Profoundly Deaf Older Adults After Hearing Rehabilitation Using Cochlear Implants
In: ISSN: 0002-8614 ; EISSN: 1532-5415 ; Journal of the American Geriatrics Society ; https://hal.archives-ouvertes.fr/hal-01958660 ; Journal of the American Geriatrics Society, Wiley, 2018, 66 (8), pp.1553--1561. ⟨10.1111/jgs.15445⟩ (2018)
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15
SIFR Annotator: Ontology-Based Semantic Annotation of French Biomedical Text and Clinical Notes
In: ISSN: 1471-2105 ; BMC Bioinformatics ; https://hal-lirmm.ccsd.cnrs.fr/lirmm-01934127 ; BMC Bioinformatics, BioMed Central, 2018, 19 (1), pp.405-431. ⟨10.1186/s12859-018-2429-2⟩ (2018)
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16
Smart graphical dialogue, based on an ontology, for a memory prosthesis ; Dialogue graphique intelligent, fondé sur une ontologie, pour une prothèse de mémoire
Ghorbel, Fatma. - : HAL CCSD, 2018
In: https://tel.archives-ouvertes.fr/tel-01884550 ; Bio-informatique [q-bio.QM]. Conservatoire national des arts et metiers - CNAM; Université de Sfax (Tunisie). Faculté des Sciences économiques et de gestion, 2018. Français. ⟨NNT : 2018CNAM1181⟩ (2018)
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17
From Patient Discharge Summaries to an Ontology for Psychiatry.
In: Studies in health technology and informatics ; https://hal.archives-ouvertes.fr/hal-03267474 ; Studies in health technology and informatics, 2017, 245, pp.930-934 (2017)
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18
Sorting permutations by prefix and suffix rearrangements
In: ISSN: 0219-7200 ; Journal of Bioinformatics and Computational Biology ; https://hal.archives-ouvertes.fr/hal-01524046 ; Journal of Bioinformatics and Computational Biology, World Scientific Publishing, 2017, 15 (1), pp.1-46. ⟨10.1142/S0219720017500020⟩ (2017)
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19
Varieties of semantic cognition revealed through simultaneous decomposition of intrinsic brain connectivity and behaviour
In: ISSN: 1053-8119 ; EISSN: 1095-9572 ; NeuroImage ; https://hal.archives-ouvertes.fr/hal-01546394 ; NeuroImage, Elsevier, 2017, pp.34. ⟨10.1016/j.neuroimage.2017.06.067⟩ (2017)
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20
Full Compressed Affix Tree Representations
In: IEEE Data Compression Conference ; DCC: Data Compression Conference ; https://hal-lirmm.ccsd.cnrs.fr/lirmm-02093302 ; DCC: Data Compression Conference, IEEE, Apr 2017, Snowbird, UT, United States. pp.102-111, ⟨10.1109/DCC.2017.39⟩ ; http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=7921793 (2017)
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