• Refine your search:
  • 
    Keyword
  • 
    Creator / Publisher:
    
    • Fayolle, Julien (2)
    • Gibrat, Jean-François (2)
    • Institut National de la Recherche Agronomique (INRA) (2)
    • Loux, Valentin (2)
    • Martin, Veronique, (2)
    • Schbath, Sophie, (2)
    • Unité Mathématique Informatique et Génome (MIG) (2)
    • Unité de Recherche Génomique Info (URGI) (2)
    • Zytnicki, Matthias (2)
    • Berthiaume, Claude (1)
    •   more
  • 
    Year
  • 
    Medium
  • 
    Type
  • 
    BLLDB-Access

Search in the Catalogues and Directories

All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year AND OR AND NOT All fields Title Creator / Publisher Keyword Year Sort by creator [A → Z]' creator [Z → A]' publishing year ↑ (asc)' publishing year ↓ (desc)' title [A → Z]' title [Z → A]' Simple Search Hits 1 – 4 of 4 1 La pertinence de l'inquiétude parentale pour le développement langagier du jeune enfant référé en psychiatrie Smolla, Nicole; Béliveau, Marie-Julie; Noël, Raphaële. - : Université du Québec à Trois-Rivières. Département de psychologie, 2015 BASE Show details 2 Mediational effects of desktop-videoconferencing telecollaborative exchanges on the intercultural communicative competence of students of french as a foreign language Martin, Veronique. - : State University of New York at Albany, 2013 BASE Show details 3 Mapping reads on a genomic sequence: an algorithmic overview and a practical comparative analysis Schbath, Sophie,; Martin, Veronique,; Zytnicki, Matthias... In: ISSN: 1066-5277 ; EISSN: 1557-8666 ; Journal of Computational Biology ; https://hal.inrae.fr/hal-02645697 ; Journal of Computational Biology, Mary Ann Liebert, 2012, 19 (6), pp.796-813. ⟨10.1089/cmb.2012.0022⟩ (2012) BASE Show details 4 Mapping reads on a genomic sequence: a practical comparative analysis Schbath, Sophie,; Martin, Veronique,; Zytnicki, Matthias; Fayolle, Julien; Loux, Valentin; Gibrat, Jean-François In: Journées Ouvertes Biologie Informatique Mathématiques (JOBIM) ; https://hal.inrae.fr/hal-02748738 ; Journées Ouvertes Biologie Informatique Mathématiques (JOBIM), Jul 2012, Rennes, France. pp.496 ; http://jobim2012.inria.fr/ (2012) Abstract: National audience ; Mapping short reads against a reference genome is classically the first step of many next-generation sequencing data analyses, and it should be as accurate as possible. Because of the large number of reads to handle, numerous sophisticated algorithms have been developped in the last 3 years to tackle this problem. In this article, we first review the underlying algorithms used in most of the existing mapping tools, and then we compare the performance of nine of these tools on a well controled benchmark built for this purpose. We built a set of reads that exist in single or multiple copies in a reference genome and for which there is no mismatch, and a set of reads with three mismatches. We considered as reference genome both the human genome and a concatenation of all complete bacterial genomes. On each dataset, we quantified the capacity of the different tools to retrieve all the occurrences of the reads in the reference genome. Special attention was paid to reads uniquely reported and to reads with multiple hits. Keyword: [INFO]Computer Science [cs]; [MATH]Mathematics [math]; [SDV.BV]Life Sciences [q-bio]/Vegetal Biology; [SDV]Life Sciences [q-bio]; benchmark; mapping reads; NGS URL: https://hal.inrae.fr/hal-02748738/document https://hal.inrae.fr/hal-02748738 https://hal.inrae.fr/hal-02748738/file/jobim12-mapping_1.pdf BASE Hide details

Mobile view All Catalogues UB Frankfurt Linguistik 0 IDS Mannheim 0 OLC Linguistik 0 UB Frankfurt Retrokatalog 0 DNB Subject Category Language 0 Institut für Empirische Sprachwissenschaft 0 Leibniz-Centre General Linguistics (ZAS) 0 Bibliographies BLLDB 0 BDSL 0 IDS Bibliografie zur deutschen Grammatik 0 IDS Bibliografie zur Gesprächsforschung 0 IDS Konnektoren im Deutschen 0 IDS Präpositionen im Deutschen 0 IDS OBELEX meta 0 MPI-SHH Linguistics Collection 0 MPI for Psycholinguistics 0 Linked Open Data catalogues Annohub 0 Online resources Link directory 0 Journal directory 0 Database directory 0 Dictionary directory 0 Open access documents BASE 4 Linguistik-Repository 0 IDS Publikationsserver 0 Online dissertations 0 Language Description Heritage 0