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Transcriptomic Profiling of DAF-7/TGFβ Pathway Mutants in C. elegans
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In: Genes ; Volume 11 ; Issue 3 (2020)
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Word and Sentence Embedding Tools to Measure Semantic Similarity of Gene Ontology Terms by Their Definitions.
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In: Journal of computational biology : a journal of computational molecular cell biology, vol 26, iss 1 (2019)
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First steps toward finding relevant pathology-gene pairs using analogy
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In: EvoCBR 2018 : Workshop on Evolutionary Computation and CBR at the International Conference on Case-Based Reasoning (ICCBR 2018) ; https://hal.inria.fr/hal-01906547 ; EvoCBR 2018 : Workshop on Evolutionary Computation and CBR at the International Conference on Case-Based Reasoning (ICCBR 2018), Jul 2018, Stockholm, Sweden (2018)
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Word and Sentence Embedding Tools to Measure Semantic Similarity of Gene Ontology Terms by Their Definitions
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In: Duong, Dat; Ahmad, Wasi Uddin; Eskin, Eleazar; Chang, Kai-Wei; & Li, Jingyi Jessica. (2018). Word and Sentence Embedding Tools to Measure Semantic Similarity of Gene Ontology Terms by Their Definitions. JOURNAL OF COMPUTATIONAL BIOLOGY, 26(1), 38 - 52. doi:10.1089/cmb.2018.0093. UCLA: Retrieved from: http://www.escholarship.org/uc/item/3j1294zk (2018)
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Evaluating computational gene ontology annotations
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In: Methods in Molecular Biology, 1446 ; The Gene Ontology Handbook (2017)
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How Can the Term Compositionality Be Useful for Acquiring Elementary Semantic Relations?
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In: Advances in Natural Language Processing (6th International Conference on NLP, GoTAL 2008) ; 6th International Conference on NLP, GoTAL 2008 ; https://hal.archives-ouvertes.fr/hal-00323241 ; 6th International Conference on NLP, GoTAL 2008, Aug 2008, Gothenburg, Sweden. pp.809-814 (2008)
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Integrating Ontological Knowledge and Textual Evidence in Estimating Gene and Gene Product Similarity
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In: Human Language Technology Conference/North American chapter of the Association for Computational Linguistics annual meeting (HLT-NAACL) June 8-9, 2006, New York City, New York. Proceedings of the BioNLP'06 Workshop on Linking Natural Language Processing and Biology: Towards deeper biological literature analysis, 25-32 (2006)
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RESEARCH ARTICLE
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In: ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/85/46/BMC_Bioinformatics_2011_Aug_5_12_325.tar.gz
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